Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF31-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484022 bp
Thymine Count
1483399 bp
Guanine Count
1069820 bp
Cytosine Count
1074558 bp
Genome Length
5112322 bp
Protein-coding Genes
4162 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp synthase subunit beta | DWZ36_09995 | Not Available | Negative | 2393367 - 2394902 | 56123.4 |
| peptidase m28 | DWZ36_10000 | Not Available | Negative | 2395098 - 2396645 | 57370.0 |
| ppx/gppa family phosphatase | DWZ36_10005 | Not Available | Negative | 2396788 - 2397702 | 34370.1 |
| rna degradosome polyphosphate kinase | DWZ36_10010 | Not Available | Negative | 2397704 - 2399770 | 79800.9 |
| glycosyltransferase | DWZ36_10015 | Not Available | Negative | 2399906 - 2401033 | 43509.6 |
| udp-2,3-diacylglucosamine diphosphatase | DWZ36_10020 | Not Available | Negative | 2401030 - 2401833 | 31136.1 |
| hypothetical protein | DWZ36_10025 | Not Available | Negative | 2402010 - 2402447 | 16855.3 |
| sensor histidine kinase | DWZ36_10030 | Not Available | Negative | 2402551 - 2403837 | 49706.0 |
| dna-binding response regulator | DWZ36_10035 | Not Available | Negative | 2403838 - 2404515 | 25927.3 |
| hypothetical protein | DWZ36_10040 | Not Available | Negative | 2404736 - 2405473 | 27845.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

