Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF31-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484022 bp
Thymine Count
1483399 bp
Guanine Count
1069820 bp
Cytosine Count
1074558 bp
Genome Length
5112322 bp
Protein-coding Genes
4162 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atpase | DWZ36_09945 | Not Available | Negative | 2384947 - 2386569 | 62408.7 |
| class i sam-dependent methyltransferase | DWZ36_09950 | Not Available | Positive | 2386820 - 2387554 | 27895.3 |
| atp synthase subunit gamma | DWZ36_09955 | Not Available | Negative | 2387642 - 2388511 | 32458.6 |
| atp synthase subunit alpha | DWZ36_09960 | Not Available | Negative | 2388514 - 2390106 | 57717.7 |
| f0f1 atp synthase subunit delta | DWZ36_09965 | Not Available | Negative | 2390228 - 2390785 | 20992.7 |
| atp synthase subunit b | DWZ36_09970 | Not Available | Negative | 2390791 - 2391291 | 18885.0 |
| atp synthase f0 subunit c | DWZ36_09975 | Not Available | Negative | 2391302 - 2391556 | 8151.6 |
| atp synthase f0 subunit a | DWZ36_09980 | Not Available | Negative | 2391588 - 2392679 | 40577.2 |
| hypothetical protein | DWZ36_09985 | Not Available | Negative | 2392681 - 2393094 | 16367.0 |
| hypothetical protein | DWZ36_09990 | Not Available | Negative | 2393104 - 2393358 | 9226.99 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

