Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF31-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484022 bp
Thymine Count
1483399 bp
Guanine Count
1069820 bp
Cytosine Count
1074558 bp
Genome Length
5112322 bp
Protein-coding Genes
4162 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWZ36_09895 | Not Available | Positive | 2370918 - 2371499 | 23365.4 |
| atp-binding protein | DWZ36_09900 | Not Available | Positive | 2371483 - 2375136 | 144642.0 |
| helicase | DWZ36_09905 | Not Available | Positive | 2375453 - 2377510 | 79323.8 |
| hypothetical protein | DWZ36_09910 | Not Available | Positive | 2377691 - 2377813 | 4309.2 |
| hypothetical protein | DWZ36_09915 | Not Available | Negative | 2377890 - 2378768 | 33591.2 |
| hypothetical protein | DWZ36_09920 | Not Available | Positive | 2379015 - 2380373 | 51090.7 |
| phosphonoacetaldehyde hydrolase | DWZ36_09925 | Not Available | Positive | 2380416 - 2381204 | 29146.5 |
| 2-aminoethylphosphonate--pyruvate transaminase | DWZ36_09930 | Not Available | Positive | 2381211 - 2382299 | 40693.9 |
| porin | DWZ36_09935 | Not Available | Negative | 2382367 - 2383518 | 43083.9 |
| vwa domain-containing protein | DWZ36_09940 | Not Available | Negative | 2383662 - 2384975 | 51547.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

