Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF31-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484022 bp
Thymine Count
1483399 bp
Guanine Count
1069820 bp
Cytosine Count
1074558 bp
Genome Length
5112322 bp
Protein-coding Genes
4162 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| copper-translocating p-type atpase | DWZ36_09840 | Not Available | Negative | 2355365 - 2357578 | 79986.0 |
| duf3298 domain-containing protein | DWZ36_09845 | Not Available | Positive | 2357757 - 2358605 | 32028.0 |
| ribosomal rna small subunit methyltransferase g | DWZ36_09850 | Not Available | Positive | 2358626 - 2359255 | 23835.2 |
| mbl fold metallo-hydrolase | DWZ36_09855 | Not Available | Positive | 2359273 - 2359911 | 23832.3 |
| glycine dehydrogenase (aminomethyl-transferring) | DWZ36_09860 | Not Available | Positive | 2359947 - 2362796 | 105238.0 |
| s9 family peptidase | DWZ36_09865 | Not Available | Negative | 2363080 - 2365794 | 102677.0 |
| hypothetical protein | DWZ36_09870 | Not Available | Negative | 2365827 - 2366063 | 8895.68 |
| hypothetical protein | DWZ36_09875 | Not Available | Positive | 2366187 - 2366414 | 8214.64 |
| formate--tetrahydrofolate ligase | DWZ36_09880 | Not Available | Negative | 2366446 - 2368113 | 60558.1 |
| hypothetical protein | DWZ36_09890 | Not Available | Positive | 2369689 - 2370912 | 48463.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

