Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF31-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484022 bp
Thymine Count
1483399 bp
Guanine Count
1069820 bp
Cytosine Count
1074558 bp
Genome Length
5112322 bp
Protein-coding Genes
4162 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase | DWZ36_09780 | Not Available | Negative | 2345558 - 2346583 | 40580.0 |
| hypothetical protein | DWZ36_09790 | Not Available | Positive | 2347304 - 2347501 | 7221.58 |
| Trna-ala | Not Available | Not Available | Positive | 2348644 - 2348717 | Not Available |
| hypothetical protein | DWZ36_09805 | Not Available | Negative | 2349370 - 2349579 | 7947.52 |
| hypothetical protein | DWZ36_09810 | Not Available | Negative | 2349748 - 2350062 | 11444.2 |
| hypothetical protein | DWZ36_09815 | Not Available | Positive | 2350309 - 2350791 | 18358.9 |
| long-chain fatty acid--coa ligase | DWZ36_09820 | Not Available | Positive | 2351003 - 2352667 | 62496.0 |
| lipoyl(octanoyl) transferase lipb | DWZ36_09825 | Not Available | Negative | 2352877 - 2353965 | 40815.6 |
| phosphohydrolase | DWZ36_09830 | Not Available | Positive | 2354031 - 2354732 | 27543.0 |
| hypothetical protein | DWZ36_09835 | Not Available | Positive | 2354729 - 2355277 | 20490.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

