Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF31-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484022 bp
Thymine Count
1483399 bp
Guanine Count
1069820 bp
Cytosine Count
1074558 bp
Genome Length
5112322 bp
Protein-coding Genes
4162 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase family 2 protein | DWZ36_09730 | Not Available | Positive | 2335334 - 2336494 | 44269.4 |
| acyltransferase | DWZ36_09735 | Not Available | Positive | 2336499 - 2337110 | 22980.1 |
| duf4422 domain-containing protein | DWZ36_09740 | Not Available | Positive | 2337095 - 2337919 | 32732.4 |
| glycosyltransferase | DWZ36_09745 | Not Available | Positive | 2337923 - 2338870 | 36866.2 |
| glycosyltransferase | DWZ36_09750 | Not Available | Negative | 2338888 - 2339703 | 31373.7 |
| glycosyl transferase | DWZ36_09755 | Not Available | Negative | 2339724 - 2340641 | 35636.8 |
| abc transporter atp-binding protein | DWZ36_09760 | Not Available | Negative | 2340657 - 2341928 | 46668.5 |
| abc transporter permease | DWZ36_09765 | Not Available | Negative | 2341942 - 2342805 | 33261.8 |
| glycosyltransferase family 4 protein | DWZ36_09770 | Not Available | Negative | 2342792 - 2343973 | 44909.2 |
| glycosyltransferase family 2 protein | DWZ36_09775 | Not Available | Positive | 2344587 - 2345537 | 37151.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

