Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF31-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484022 bp
Thymine Count
1483399 bp
Guanine Count
1069820 bp
Cytosine Count
1074558 bp
Genome Length
5112322 bp
Protein-coding Genes
4162 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf86 domain-containing protein | DWZ36_09580 | Not Available | Negative | 2299143 - 2299517 | 14517.8 |
| nucleotidyltransferase | DWZ36_09585 | Not Available | Negative | 2299510 - 2299803 | 11121.5 |
| carboxypeptidase-like regulatory domain-containing protein | DWZ36_09590 | Not Available | Negative | 2299914 - 2302487 | 99185.7 |
| phosphate transport system regulatory protein phou | DWZ36_09595 | Not Available | Negative | 2302889 - 2303590 | 26687.2 |
| phosphate abc transporter atp-binding protein | DWZ36_09600 | Not Available | Negative | 2303794 - 2304546 | 28156.9 |
| phosphate abc transporter permease psta | DWZ36_09605 | Not Available | Negative | 2304644 - 2305531 | 32091.4 |
| phosphate abc transporter permease subunit pstc | DWZ36_09610 | Not Available | Negative | 2305629 - 2306816 | 42864.7 |
| psts family phosphate abc transporter substrate-binding protein | DWZ36_09615 | Not Available | Positive | 2307084 - 2307902 | 29967.5 |
| glutamine--trna ligase/yqey domain fusion protein | DWZ36_09620 | Not Available | Positive | 2307960 - 2309699 | 66876.0 |
| tetratricopeptide repeat protein | DWZ36_09625 | Not Available | Positive | 2309710 - 2311227 | 59048.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

