Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF31-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484022 bp
Thymine Count
1483399 bp
Guanine Count
1069820 bp
Cytosine Count
1074558 bp
Genome Length
5112322 bp
Protein-coding Genes
4162 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha-1,2-fucosyltransferase | DWZ36_09530 | Not Available | Negative | 2289527 - 2290345 | 32682.2 |
| hypothetical protein | DWZ36_09535 | Not Available | Negative | 2290365 - 2291243 | 34609.0 |
| glycosyltransferase family 2 protein | DWZ36_09540 | Not Available | Negative | 2291240 - 2292238 | 38897.9 |
| glycosyltransferase family 2 protein | DWZ36_09545 | Not Available | Negative | 2292240 - 2293175 | 36461.1 |
| hypothetical protein | DWZ36_09550 | Not Available | Negative | 2293189 - 2294436 | 48976.6 |
| flippase | DWZ36_09555 | Not Available | Negative | 2294517 - 2295941 | 53945.8 |
| hypothetical protein | DWZ36_09560 | Not Available | Negative | 2296116 - 2296832 | 26883.9 |
| hypothetical protein | DWZ36_09565 | Not Available | Negative | 2297055 - 2297246 | 7786.43 |
| hypothetical protein | DWZ36_09570 | Not Available | Negative | 2297348 - 2297569 | 8814.42 |
| transcriptional regulator | DWZ36_09575 | Not Available | Negative | 2297686 - 2298783 | 42364.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

