Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF31-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484022 bp
Thymine Count
1483399 bp
Guanine Count
1069820 bp
Cytosine Count
1074558 bp
Genome Length
5112322 bp
Protein-coding Genes
4162 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| toprim domain-containing protein | DWZ36_09475 | Not Available | Negative | 2279159 - 2280670 | 57631.4 |
| duf4373 domain-containing protein | DWZ36_09480 | Not Available | Negative | 2281144 - 2282637 | 56364.2 |
| hypothetical protein | DWZ36_09485 | Not Available | Negative | 2282871 - 2283128 | 9886.83 |
| putative toxin-antitoxin system toxin component, pin family | DWZ36_09490 | Not Available | Negative | 2283237 - 2283644 | 15784.8 |
| hypothetical protein | DWZ36_09495 | Not Available | Negative | 2283658 - 2283873 | 8582.31 |
| hypothetical protein | DWZ36_09500 | Not Available | Negative | 2284063 - 2284884 | 31213.3 |
| hypothetical protein | DWZ36_09510 | Not Available | Negative | 2286074 - 2286421 | 13486.0 |
| glycosyltransferase | DWZ36_09515 | Not Available | Negative | 2286354 - 2287112 | 29368.9 |
| glycosyltransferase | DWZ36_09520 | Not Available | Negative | 2287277 - 2288443 | 44842.8 |
| acyltransferase | DWZ36_09525 | Not Available | Negative | 2288448 - 2289518 | 41785.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

