Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF31-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484022 bp
Thymine Count
1483399 bp
Guanine Count
1069820 bp
Cytosine Count
1074558 bp
Genome Length
5112322 bp
Protein-coding Genes
4162 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| adenylyl-sulfate kinase | DWZ36_09320 | Not Available | Negative | 2245683 - 2246297 | 22681.6 |
| slc13/dass family transporter | DWZ36_09325 | Not Available | Negative | 2246327 - 2247880 | 56645.7 |
| 3'(2'),5'-bisphosphate nucleotidase | DWZ36_09330 | Not Available | Negative | 2247896 - 2248705 | 30250.0 |
| hypothetical protein | DWZ36_09335 | Not Available | Negative | 2248720 - 2249928 | 45833.1 |
| dna mismatch repair endonuclease mutl | DWZ36_09340 | Not Available | Negative | 2250157 - 2252025 | 68716.8 |
| hypothetical protein | DWZ36_09345 | Not Available | Negative | 2252047 - 2252343 | 11737.6 |
| hypothetical protein | DWZ36_09350 | Not Available | Negative | 2252346 - 2254013 | 63852.4 |
| peptidylprolyl isomerase | DWZ36_09355 | Not Available | Negative | 2254031 - 2255389 | 52289.8 |
| peptidyl-prolyl cis-trans isomerase | DWZ36_09360 | Not Available | Negative | 2255394 - 2256266 | 34104.5 |
| peptidylprolyl isomerase | DWZ36_09365 | Not Available | Negative | 2256303 - 2257640 | 52178.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

