Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF31-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484022 bp
Thymine Count
1483399 bp
Guanine Count
1069820 bp
Cytosine Count
1074558 bp
Genome Length
5112322 bp
Protein-coding Genes
4162 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWZ36_09220 | Not Available | Positive | 2222347 - 2222592 | 9439.5 |
| dead/deah box helicase | DWZ36_09225 | Not Available | Negative | 2222668 - 2223972 | 48294.5 |
| hypothetical protein | DWZ36_09230 | Not Available | Negative | 2224176 - 2226632 | 89629.4 |
| endonuclease/exonuclease/phosphatase family protein | DWZ36_09235 | Not Available | Negative | 2226660 - 2227598 | 34990.7 |
| cysteine synthase a | DWZ36_09240 | Not Available | Positive | 2227744 - 2228694 | 33551.6 |
| trna 2-thiouridine(34) synthase mnma | DWZ36_09245 | Not Available | Positive | 2228701 - 2229765 | 39768.7 |
| dna-binding response regulator | DWZ36_09250 | Not Available | Negative | 2229762 - 2230412 | 24599.1 |
| Trna-val | Not Available | Not Available | Positive | 2230481 - 2230558 | Not Available |
| Trna-val | Not Available | Not Available | Positive | 2230596 - 2230673 | Not Available |
| Trna-val | Not Available | Not Available | Positive | 2230712 - 2230786 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

