Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF31-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484022 bp
Thymine Count
1483399 bp
Guanine Count
1069820 bp
Cytosine Count
1074558 bp
Genome Length
5112322 bp
Protein-coding Genes
4162 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fecr family protein | DWZ36_09170 | Not Available | Positive | 2204717 - 2205652 | 36575.9 |
| susc/raga family tonb-linked outer membrane protein | DWZ36_09175 | Not Available | Positive | 2205805 - 2209158 | 124318.0 |
| ragb/susd family nutrient uptake outer membrane protein | DWZ36_09180 | Not Available | Positive | 2209172 - 2210713 | 59338.3 |
| duf4982 domain-containing protein | DWZ36_09185 | Not Available | Positive | 2210812 - 2213259 | 92753.4 |
| glycoside hydrolase | DWZ36_09190 | Not Available | Positive | 2213256 - 2215337 | 80510.8 |
| glycoside hydrolase family 2 protein | DWZ36_09195 | Not Available | Positive | 2215400 - 2218078 | 101280.0 |
| arylsulfatase | DWZ36_09200 | Not Available | Positive | 2218193 - 2219791 | 60943.1 |
| duf1566 domain-containing protein | DWZ36_09205 | Not Available | Positive | 2220073 - 2221623 | 55019.8 |
| hypothetical protein | DWZ36_09210 | Not Available | Negative | 2221656 - 2221865 | 7826.78 |
| nadh-ubiquinone oxidoreductase | DWZ36_09215 | Not Available | Positive | 2221938 - 2222171 | 8572.76 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

