Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF31-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484022 bp
Thymine Count
1483399 bp
Guanine Count
1069820 bp
Cytosine Count
1074558 bp
Genome Length
5112322 bp
Protein-coding Genes
4162 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sam-dependent methyltransferase | DWZ36_09010 | Not Available | Positive | 2151249 - 2151932 | 26029.9 |
| hypothetical protein | DWZ36_09015 | Not Available | Negative | 2152329 - 2155211 | 106090.0 |
| arac family transcriptional regulator | DWZ36_09020 | Not Available | Negative | 2155269 - 2155766 | 19135.2 |
| hypothetical protein | DWZ36_09025 | Not Available | Negative | 2155952 - 2156179 | 9095.39 |
| zinc abc transporter substrate-binding protein | DWZ36_09030 | Not Available | Positive | 2156441 - 2157346 | 34053.5 |
| metal abc transporter atp-binding protein | DWZ36_09035 | Not Available | Positive | 2157356 - 2158123 | 28695.6 |
| duf2723 domain-containing protein | DWZ36_09040 | Not Available | Positive | 2158584 - 2161988 | 129139.0 |
| polysaccharide deacetylase family protein | DWZ36_09045 | Not Available | Positive | 2162059 - 2162670 | 24627.9 |
| duf4861 domain-containing protein | DWZ36_09050 | Not Available | Negative | 2162728 - 2163900 | 42906.5 |
| gluconate 5-dehydrogenase | DWZ36_09055 | Not Available | Negative | 2163997 - 2164800 | 28590.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

