Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF31-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484022 bp
Thymine Count
1483399 bp
Guanine Count
1069820 bp
Cytosine Count
1074558 bp
Genome Length
5112322 bp
Protein-coding Genes
4162 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyl-coa dehydrogenase | DWZ36_08860 | Not Available | Negative | 2115282 - 2116988 | 63864.0 |
| four helix bundle protein | DWZ36_08865 | Not Available | Negative | 2117030 - 2117410 | 14337.4 |
| electron transfer flavoprotein subunit alpha/fixb family protein | DWZ36_08870 | Not Available | Negative | 2117446 - 2118465 | 36698.3 |
| electron transfer flavoprotein beta subunit/fixa family protein | DWZ36_08875 | Not Available | Negative | 2118471 - 2119364 | 31873.2 |
| hypothetical protein | DWZ36_08880 | Not Available | Positive | 2119731 - 2119991 | 9561.44 |
| hypothetical protein | DWZ36_08885 | Not Available | Positive | 2120070 - 2121134 | 40208.2 |
| hypothetical protein | DWZ36_08890 | Not Available | Positive | 2121131 - 2121709 | 22821.9 |
| signal peptidase i | DWZ36_08895 | Not Available | Positive | 2121706 - 2122527 | 32001.6 |
| hypothetical protein | DWZ36_08900 | Not Available | Positive | 2122681 - 2123223 | 19666.0 |
| tolc family protein | DWZ36_08905 | Not Available | Positive | 2123355 - 2124752 | 52018.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

