Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF31-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484022 bp
Thymine Count
1483399 bp
Guanine Count
1069820 bp
Cytosine Count
1074558 bp
Genome Length
5112322 bp
Protein-coding Genes
4162 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arac family transcriptional regulator | DWZ36_00820 | Not Available | Positive | 186747 - 187637 | 34355.3 |
| glycoside hydrolase | DWZ36_00825 | Not Available | Positive | 187971 - 189485 | 55607.4 |
| tonb-dependent receptor | DWZ36_00830 | Not Available | Positive | 190316 - 193345 | 110502.0 |
| ragb/susd family nutrient uptake outer membrane protein | DWZ36_00835 | Not Available | Positive | 193372 - 195138 | 67709.4 |
| aryl-sulfate sulfotransferase | DWZ36_00840 | Not Available | Positive | 195340 - 197139 | 68255.0 |
| glycosidase | DWZ36_00845 | Not Available | Positive | 197253 - 198431 | 44114.3 |
| alkaline phosphatase | DWZ36_00850 | Not Available | Positive | 198589 - 199491 | 33013.7 |
| sodium:solute symporter | DWZ36_00855 | Not Available | Positive | 199509 - 201392 | 70766.6 |
| hypothetical protein | DWZ36_00860 | Not Available | Negative | 201784 - 202080 | 11205.8 |
| aldo/keto reductase | DWZ36_00865 | Not Available | Positive | 202317 - 203699 | 52266.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

