Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF31-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484022 bp
Thymine Count
1483399 bp
Guanine Count
1069820 bp
Cytosine Count
1074558 bp
Genome Length
5112322 bp
Protein-coding Genes
4162 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| adenosylcobinamide-gdp ribazoletransferase | DWZ36_08455 | Not Available | Negative | 2014422 - 2015171 | 27796.7 |
| nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase | DWZ36_08460 | Not Available | Negative | 2015174 - 2016211 | 37449.5 |
| bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase | DWZ36_08465 | Not Available | Negative | 2016220 - 2016729 | 19446.2 |
| fha domain-containing protein | DWZ36_08470 | Not Available | Negative | 2016734 - 2017258 | 19818.0 |
| spor domain-containing protein | DWZ36_08475 | Not Available | Negative | 2017274 - 2018404 | 42083.4 |
| udp-glucose/gdp-mannose dehydrogenase family protein | DWZ36_08480 | Not Available | Positive | 2018523 - 2019836 | 48150.3 |
| duf4738 domain-containing protein | DWZ36_08485 | Not Available | Positive | 2019860 - 2020648 | 29375.2 |
| hypothetical protein | DWZ36_08490 | Not Available | Positive | 2020699 - 2020974 | 10147.1 |
| dead/deah box helicase | DWZ36_08495 | Not Available | Negative | 2021360 - 2022637 | 47461.1 |
| phosphoserine phosphatase serb | DWZ36_08500 | Not Available | Negative | 2022658 - 2023890 | 46069.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

