Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF31-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484022 bp
Thymine Count
1483399 bp
Guanine Count
1069820 bp
Cytosine Count
1074558 bp
Genome Length
5112322 bp
Protein-coding Genes
4162 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWZ36_08385 | Not Available | Positive | 2002694 - 2003674 | 35815.1 |
| hypothetical protein | DWZ36_08390 | Not Available | Positive | 2003696 - 2003971 | 10368.3 |
| hypothetical protein | DWZ36_08395 | Not Available | Positive | 2004169 - 2004447 | 10177.2 |
| hypothetical protein | DWZ36_08400 | Not Available | Negative | 2004903 - 2005100 | 7652.2 |
| site-specific integrase | DWZ36_08405 | Not Available | Positive | 2005253 - 2006491 | 47944.5 |
| hypothetical protein | DWZ36_08410 | Not Available | Negative | 2007633 - 2008886 | 48858.8 |
| hypothetical protein | DWZ36_08415 | Not Available | Negative | 2009876 - 2010181 | 10751.8 |
| hypothetical protein | DWZ36_08430 | Not Available | Positive | 2012119 - 2012370 | 9393.15 |
| duf1622 domain-containing protein | DWZ36_08445 | Not Available | Negative | 2013505 - 2013846 | 12505.8 |
| alpha-ribazole phosphatase | DWZ36_08450 | Not Available | Negative | 2013898 - 2014428 | 20094.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

