Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF31-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484022 bp
Thymine Count
1483399 bp
Guanine Count
1069820 bp
Cytosine Count
1074558 bp
Genome Length
5112322 bp
Protein-coding Genes
4162 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWZ36_08330 | Not Available | Positive | 1986557 - 1989298 | 103479.0 |
| hypothetical protein | DWZ36_08335 | Not Available | Positive | 1989302 - 1989826 | 19555.5 |
| phage portal protein | DWZ36_08340 | Not Available | Positive | 1989823 - 1991346 | 57540.5 |
| hypothetical protein | DWZ36_08350 | Not Available | Positive | 1995318 - 1995656 | 11839.9 |
| hypothetical protein | DWZ36_08355 | Not Available | Positive | 1995663 - 1996094 | 16107.7 |
| sgnh/gdsl hydrolase family protein | DWZ36_08360 | Not Available | Positive | 1996162 - 1998366 | 83209.1 |
| hypothetical protein | DWZ36_08365 | Not Available | Positive | 1998462 - 2000147 | 62877.7 |
| hypothetical protein | DWZ36_08370 | Not Available | Positive | 2000162 - 2001307 | 41821.0 |
| hypothetical protein | DWZ36_08375 | Not Available | Positive | 2001327 - 2001638 | 11097.6 |
| hypothetical protein | DWZ36_08380 | Not Available | Positive | 2001635 - 2002684 | 37599.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

