Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF31-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484022 bp
Thymine Count
1483399 bp
Guanine Count
1069820 bp
Cytosine Count
1074558 bp
Genome Length
5112322 bp
Protein-coding Genes
4162 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| m3 family peptidase | DWZ36_08180 | Not Available | Positive | 1958682 - 1960787 | 79164.9 |
| acyltransferase | DWZ36_08185 | Not Available | Positive | 1960968 - 1962128 | 44353.2 |
| hypothetical protein | DWZ36_08190 | Not Available | Negative | 1962235 - 1963089 | 31763.9 |
| hypothetical protein | DWZ36_08195 | Not Available | Positive | 1963096 - 1963326 | 9075.28 |
| glycosyltransferase | DWZ36_08200 | Not Available | Negative | 1963230 - 1963943 | 27593.7 |
| glycosyltransferase family 1 protein | DWZ36_08205 | Not Available | Negative | 1963952 - 1965046 | 41358.6 |
| glycosyl transferase | DWZ36_08210 | Not Available | Negative | 1965048 - 1966961 | 74893.3 |
| hypothetical protein | DWZ36_08215 | Not Available | Positive | 1966974 - 1967750 | 29603.7 |
| hypothetical protein | DWZ36_08220 | Not Available | Positive | 1967844 - 1968062 | 8605.04 |
| damage-inducible protein | DWZ36_08225 | Not Available | Negative | 1968559 - 1969359 | 30685.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

