Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF31-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484022 bp
Thymine Count
1483399 bp
Guanine Count
1069820 bp
Cytosine Count
1074558 bp
Genome Length
5112322 bp
Protein-coding Genes
4162 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | DWZ36_08025 | Not Available | Positive | 1917034 - 1918008 | 36382.4 |
| transaldolase | DWZ36_08030 | Not Available | Positive | 1918105 - 1918761 | 23527.5 |
| arac family transcriptional regulator | DWZ36_08035 | Not Available | Positive | 1918913 - 1919836 | 36234.0 |
| hypothetical protein | DWZ36_08040 | Not Available | Negative | 1919911 - 1920738 | 31907.4 |
| penicillin-binding protein | DWZ36_08045 | Not Available | Negative | 1920945 - 1923272 | 88345.2 |
| aspartate carbamoyltransferase | DWZ36_08050 | Not Available | Positive | 1923433 - 1924374 | 36259.7 |
| aspartate carbamoyltransferase regulatory subunit | DWZ36_08055 | Not Available | Positive | 1924383 - 1924850 | 17408.3 |
| flavin reductase family protein | DWZ36_08060 | Not Available | Positive | 1924856 - 1925443 | 21914.5 |
| port family protein | DWZ36_08065 | Not Available | Positive | 1925453 - 1926172 | 27400.6 |
| serine hydroxymethyltransferase | DWZ36_08070 | Not Available | Positive | 1926419 - 1927699 | 46829.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

