Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF31-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484022 bp
Thymine Count
1483399 bp
Guanine Count
1069820 bp
Cytosine Count
1074558 bp
Genome Length
5112322 bp
Protein-coding Genes
4162 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 1,4-alpha-glucan-branching enzyme | DWZ36_07970 | Not Available | Negative | 1908375 - 1910402 | 78102.2 |
| yhch/yjgk/yial family protein | DWZ36_07975 | Not Available | Negative | 1910431 - 1910871 | 16248.5 |
| duf2461 domain-containing protein | DWZ36_07980 | Not Available | Negative | 1910908 - 1911573 | 25851.7 |
| inositol monophosphatase | DWZ36_07985 | Not Available | Negative | 1911649 - 1912437 | 29098.5 |
| phosphatidylinositol-4-phosphate 5-kinase | DWZ36_07990 | Not Available | Negative | 1912445 - 1913563 | 42496.8 |
| insulinase family protein | DWZ36_07995 | Not Available | Negative | 1913635 - 1914921 | 48625.5 |
| 3-deoxy-manno-octulosonate cytidylyltransferase | DWZ36_08000 | Not Available | Negative | 1914922 - 1915680 | 28075.6 |
| 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase | DWZ36_08005 | Not Available | Positive | 1915759 - 1916133 | 14212.0 |
| transporter | DWZ36_08015 | Not Available | Positive | 1916620 - 1916868 | 9593.48 |
| transporter | DWZ36_08020 | Not Available | Positive | 1916840 - 1917037 | 7368.71 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

