Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF31-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484022 bp
Thymine Count
1483399 bp
Guanine Count
1069820 bp
Cytosine Count
1074558 bp
Genome Length
5112322 bp
Protein-coding Genes
4162 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna polymerase iii subunit delta | DWZ36_07920 | Not Available | Negative | 1899401 - 1900417 | 38857.2 |
| amp nucleosidase | DWZ36_07925 | Not Available | Negative | 1900429 - 1901205 | 29142.2 |
| hypothetical protein | DWZ36_07930 | Not Available | Positive | 1901263 - 1901712 | 17607.4 |
| hypothetical protein | DWZ36_07935 | Not Available | Negative | 1901813 - 1902604 | 30517.8 |
| nif3-like dinuclear metal center hexameric protein | DWZ36_07940 | Not Available | Negative | 1902613 - 1903707 | 40621.9 |
| hypothetical protein | DWZ36_07945 | Not Available | Negative | 1903769 - 1904047 | 10839.2 |
| abc transporter permease | DWZ36_07950 | Not Available | Negative | 1904106 - 1904903 | 29543.7 |
| atp-binding cassette domain-containing protein | DWZ36_07955 | Not Available | Negative | 1904912 - 1905580 | 24500.8 |
| proline--trna ligase | DWZ36_07960 | Not Available | Negative | 1905615 - 1907105 | 56833.0 |
| hypothetical protein | DWZ36_07965 | Not Available | Negative | 1907220 - 1908371 | 44031.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

