Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF31-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484022 bp
Thymine Count
1483399 bp
Guanine Count
1069820 bp
Cytosine Count
1074558 bp
Genome Length
5112322 bp
Protein-coding Genes
4162 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nadh:ubiquinone reductase (na(+)-transporting) subunit e | DWZ36_07270 | Not Available | Negative | 1759729 - 1760325 | 21276.9 |
| nadh:ubiquinone reductase (na(+)-transporting) subunit d | DWZ36_07275 | Not Available | Negative | 1760350 - 1760988 | 23121.2 |
| na(+)-translocating nadh-quinone reductase subunit c | DWZ36_07280 | Not Available | Negative | 1761007 - 1761681 | 24676.3 |
| nadh:ubiquinone reductase (na(+)-transporting) subunit b | DWZ36_07285 | Not Available | Negative | 1761695 - 1762903 | 43554.0 |
| na(+)-translocating nadh-quinone reductase subunit a | DWZ36_07290 | Not Available | Negative | 1762932 - 1764281 | 49524.8 |
| hypothetical protein | DWZ36_07295 | Not Available | Negative | 1764527 - 1765327 | 30650.3 |
| hypothetical protein | DWZ36_07300 | Not Available | Positive | 1765467 - 1765748 | 10819.8 |
| hypothetical protein | DWZ36_07305 | Not Available | Positive | 1765858 - 1766118 | 9495.47 |
| aminopeptidase | DWZ36_07320 | Not Available | Negative | 1768536 - 1769912 | 51854.2 |
| sodium:proton antiporter | DWZ36_07325 | Not Available | Negative | 1770024 - 1771475 | 51409.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

