Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF31-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484022 bp
Thymine Count
1483399 bp
Guanine Count
1069820 bp
Cytosine Count
1074558 bp
Genome Length
5112322 bp
Protein-coding Genes
4162 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf58 domain-containing protein | DWZ36_07020 | Not Available | Negative | 1707815 - 1708684 | 33748.5 |
| atpase | DWZ36_07025 | Not Available | Negative | 1708934 - 1709929 | 37374.8 |
| hu family dna-binding protein | DWZ36_07030 | Not Available | Negative | 1710215 - 1711645 | 52640.7 |
| hu family dna-binding protein | DWZ36_07035 | Not Available | Negative | 1711671 - 1711943 | 10174.5 |
| 30s ribosomal protein s12 methylthiotransferase rimo | DWZ36_07040 | Not Available | Negative | 1712017 - 1713315 | 50104.2 |
| signal recognition particle-docking protein ftsy | DWZ36_07045 | Not Available | Negative | 1713319 - 1714278 | 34716.9 |
| duf4295 domain-containing protein | DWZ36_07050 | Not Available | Negative | 1714452 - 1714607 | 5827.19 |
| 50s ribosomal protein l33 | DWZ36_07055 | Not Available | Negative | 1714617 - 1714805 | 7205.97 |
| 50s ribosomal protein l28 | DWZ36_07060 | Not Available | Negative | 1714826 - 1715086 | 9789.04 |
| cina family protein | DWZ36_07065 | Not Available | Negative | 1715191 - 1715691 | 17534.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

