Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF31-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484022 bp
Thymine Count
1483399 bp
Guanine Count
1069820 bp
Cytosine Count
1074558 bp
Genome Length
5112322 bp
Protein-coding Genes
4162 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rhodanese-like domain-containing protein | DWZ36_06970 | Not Available | Positive | 1698077 - 1698475 | 15066.1 |
| universal stress protein | DWZ36_06975 | Not Available | Negative | 1698909 - 1700036 | 43139.9 |
| dna-binding protein | DWZ36_06980 | Not Available | Negative | 1700112 - 1700381 | 9982.98 |
| phosphatase pap2 family protein | DWZ36_06985 | Not Available | Negative | 1700511 - 1701218 | 26838.5 |
| tetratricopeptide repeat protein | DWZ36_06990 | Not Available | Negative | 1701229 - 1702047 | 30730.3 |
| protein batd | DWZ36_06995 | Not Available | Negative | 1702067 - 1703902 | 67735.9 |
| tetratricopeptide repeat protein | DWZ36_07000 | Not Available | Negative | 1703942 - 1704649 | 27631.4 |
| vwa domain-containing protein | DWZ36_07005 | Not Available | Negative | 1704659 - 1705681 | 37883.2 |
| vwa domain-containing protein | DWZ36_07010 | Not Available | Negative | 1705694 - 1706692 | 37238.6 |
| hypothetical protein | DWZ36_07015 | Not Available | Negative | 1706712 - 1707809 | 41549.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

