Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF31-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484022 bp
Thymine Count
1483399 bp
Guanine Count
1069820 bp
Cytosine Count
1074558 bp
Genome Length
5112322 bp
Protein-coding Genes
4162 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gnat family n-acetyltransferase | DWZ36_06810 | Not Available | Negative | 1655028 - 1656038 | 39140.1 |
| duf2156 domain-containing protein | DWZ36_06815 | Not Available | Negative | 1656022 - 1656924 | 34354.3 |
| lrgb family protein | DWZ36_06820 | Not Available | Negative | 1657148 - 1657843 | 24440.0 |
| cida/lrga family protein | DWZ36_06825 | Not Available | Negative | 1657824 - 1658177 | 13036.8 |
| phosphate acetyltransferase | DWZ36_06830 | Not Available | Positive | 1658380 - 1659393 | 35492.5 |
| acetate kinase | DWZ36_06835 | Not Available | Positive | 1659419 - 1660615 | 42809.0 |
| udp-2,3-diacylglucosamine diphosphatase | DWZ36_06840 | Not Available | Negative | 1660680 - 1661447 | 29795.7 |
| duf59 domain-containing protein | DWZ36_06845 | Not Available | Negative | 1661579 - 1661899 | 11973.4 |
| dna repair protein radc | DWZ36_06850 | Not Available | Negative | 1661936 - 1662625 | 25685.1 |
| glycosyltransferase | DWZ36_06855 | Not Available | Negative | 1662698 - 1663687 | 37604.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

