Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF31-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484022 bp
Thymine Count
1483399 bp
Guanine Count
1069820 bp
Cytosine Count
1074558 bp
Genome Length
5112322 bp
Protein-coding Genes
4162 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWZ36_06650 | Not Available | Negative | 1594383 - 1594580 | 7551.65 |
| hypothetical protein | DWZ36_06655 | Not Available | Negative | 1594761 - 1595213 | 17226.2 |
| atp-dependent exonuclease | DWZ36_06660 | Not Available | Negative | 1595262 - 1598345 | 116262.0 |
| exonuclease subunit sbcd | DWZ36_06665 | Not Available | Negative | 1598342 - 1599544 | 44927.8 |
| hypothetical protein | DWZ36_06670 | Not Available | Positive | 1599716 - 1599991 | 10421.8 |
| addiction module toxin rele | DWZ36_06675 | Not Available | Positive | 1599981 - 1600322 | 12875.8 |
| glycosyl hydrolase | DWZ36_06680 | Not Available | Negative | 1600375 - 1602726 | 88902.2 |
| beta-galactosidase | DWZ36_06685 | Not Available | Negative | 1602837 - 1605185 | 88335.6 |
| alpha-l-arabinofuranosidase | DWZ36_06690 | Not Available | Negative | 1605202 - 1607700 | 92435.5 |
| glycoside hydrolase | DWZ36_06695 | Not Available | Negative | 1607728 - 1609674 | 73314.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

