Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF31-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484022 bp
Thymine Count
1483399 bp
Guanine Count
1069820 bp
Cytosine Count
1074558 bp
Genome Length
5112322 bp
Protein-coding Genes
4162 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| udp-n-acetylmuramoyl-l-alanyl-d-glutamate--2, 6-diaminopimelate ligase | DWZ36_06600 | Not Available | Positive | 1582034 - 1583488 | 53314.3 |
| phospho-n-acetylmuramoyl-pentapeptide- transferase | DWZ36_06605 | Not Available | Positive | 1583501 - 1584769 | 47029.8 |
| udp-n-acetylmuramoyl-l-alanine--d-glutamate ligase | DWZ36_06610 | Not Available | Positive | 1584784 - 1586118 | 49945.6 |
| ftsw/roda/spove family cell cycle protein | DWZ36_06615 | Not Available | Positive | 1586142 - 1587539 | 51362.1 |
| undecaprenyldiphospho-muramoylpentapeptide beta-n- acetylglucosaminyltransferase | DWZ36_06620 | Not Available | Positive | 1587604 - 1588734 | 40466.6 |
| udp-n-acetylmuramate--l-alanine ligase | DWZ36_06625 | Not Available | Positive | 1588724 - 1590100 | 51104.2 |
| cell division protein ftsq | DWZ36_06630 | Not Available | Positive | 1590097 - 1590834 | 27832.3 |
| cell division protein ftsa | DWZ36_06635 | Not Available | Positive | 1590838 - 1592340 | 54983.8 |
| cell division protein ftsz | DWZ36_06640 | Not Available | Positive | 1592378 - 1593682 | 47936.9 |
| gatb/yqey domain-containing protein | DWZ36_06645 | Not Available | Positive | 1593704 - 1594153 | 15932.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

