Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF31-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484022 bp
Thymine Count
1483399 bp
Guanine Count
1069820 bp
Cytosine Count
1074558 bp
Genome Length
5112322 bp
Protein-coding Genes
4162 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetratricopeptide repeat protein | DWZ36_06550 | Not Available | Negative | 1571991 - 1573799 | 69707.2 |
| dutp diphosphatase | DWZ36_06555 | Not Available | Negative | 1573809 - 1574243 | 15780.1 |
| deoxyguanosinetriphosphate triphosphohydrolase | DWZ36_06560 | Not Available | Positive | 1574466 - 1575797 | 50252.4 |
| gnat family n-acetyltransferase | DWZ36_06565 | Not Available | Negative | 1575886 - 1576866 | 37508.3 |
| glycerol acyltransferase | DWZ36_06570 | Not Available | Negative | 1576890 - 1577708 | 30976.8 |
| hypothetical protein | DWZ36_06575 | Not Available | Positive | 1577814 - 1578041 | 8945.2 |
| transcriptional regulator mraz | DWZ36_06580 | Not Available | Positive | 1578076 - 1578540 | 18115.8 |
| 16s rrna (cytosine(1402)-n(4))-methyltransferase rsmh | DWZ36_06585 | Not Available | Positive | 1578537 - 1579451 | 34418.3 |
| hypothetical protein | DWZ36_06590 | Not Available | Positive | 1579456 - 1579830 | 14479.4 |
| pasta domain-containing protein | DWZ36_06595 | Not Available | Positive | 1579835 - 1582015 | 80341.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

