Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF31-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484022 bp
Thymine Count
1483399 bp
Guanine Count
1069820 bp
Cytosine Count
1074558 bp
Genome Length
5112322 bp
Protein-coding Genes
4162 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWZ36_06395 | Not Available | Positive | 1543043 - 1543282 | 9320.14 |
| hypothetical protein | DWZ36_06400 | Not Available | Negative | 1543351 - 1543641 | 11635.0 |
| hypothetical protein | DWZ36_06405 | Not Available | Positive | 1543862 - 1544200 | 13339.0 |
| dde transposase | DWZ36_06410 | Not Available | Positive | 1544259 - 1545179 | 35807.4 |
| Trna-leu | Not Available | Not Available | Positive | 1545408 - 1545494 | Not Available |
| mannose-1-phosphate guanylyltransferase | DWZ36_06420 | Not Available | Positive | 1545679 - 1546722 | 39478.3 |
| hit family protein | DWZ36_06425 | Not Available | Negative | 1546810 - 1547217 | 15026.2 |
| transcription elongation factor grea | DWZ36_06430 | Not Available | Negative | 1547269 - 1547733 | 16780.4 |
| duf4369 domain-containing protein | DWZ36_06435 | Not Available | Negative | 1547934 - 1549082 | 42886.3 |
| polyribonucleotide nucleotidyltransferase | DWZ36_06440 | Not Available | Positive | 1549298 - 1551433 | 78631.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

