Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF31-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484022 bp
Thymine Count
1483399 bp
Guanine Count
1069820 bp
Cytosine Count
1074558 bp
Genome Length
5112322 bp
Protein-coding Genes
4162 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cob(i)yrinic acid a,c-diamide adenosyltransferase | DWZ36_06285 | Not Available | Negative | 1523169 - 1523732 | 21334.7 |
| hypothetical protein | DWZ36_06290 | Not Available | Negative | 1523741 - 1524364 | 24621.8 |
| aminopeptidase | DWZ36_06295 | Not Available | Positive | 1524469 - 1525779 | 50782.5 |
| acetyl-coa carboxylase biotin carboxyl carrier protein subunit | DWZ36_06305 | Not Available | Negative | 1527485 - 1528000 | 19041.9 |
| acetyl-coa carboxylase biotin carboxylase subunit | DWZ36_06310 | Not Available | Negative | 1528025 - 1529536 | 57013.6 |
| duf488 family protein | DWZ36_06315 | Not Available | Negative | 1529713 - 1530069 | 14248.8 |
| n-acetyltransferase | DWZ36_06320 | Not Available | Negative | 1530143 - 1530628 | 18784.7 |
| gnat family n-acetyltransferase | DWZ36_06325 | Not Available | Positive | 1530733 - 1531164 | 16263.8 |
| n-acetyltransferase | DWZ36_06330 | Not Available | Positive | 1531182 - 1531703 | 20094.9 |
| luxr family transcriptional regulator | DWZ36_06340 | Not Available | Positive | 1534217 - 1534981 | 29423.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

