Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF31-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484022 bp
Thymine Count
1483399 bp
Guanine Count
1069820 bp
Cytosine Count
1074558 bp
Genome Length
5112322 bp
Protein-coding Genes
4162 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| energy transducer tonb | DWZ36_06080 | Not Available | Negative | 1482602 - 1484371 | 67794.8 |
| hypothetical protein | DWZ36_06085 | Not Available | Positive | 1484464 - 1484780 | 12159.6 |
| hypothetical protein | DWZ36_06090 | Not Available | Positive | 1484801 - 1485274 | 18042.7 |
| Trna-pseudo | Not Available | Not Available | Positive | 1485817 - 1485890 | Not Available |
| hypothetical protein | DWZ36_06095 | Not Available | Negative | 1485756 - 1486019 | 10146.5 |
| hypothetical protein | DWZ36_06100 | Not Available | Positive | 1486019 - 1486210 | 7293.26 |
| had family hydrolase | DWZ36_06110 | Not Available | Negative | 1486676 - 1487314 | 23851.1 |
| sugar o-acetyltransferase | DWZ36_06115 | Not Available | Negative | 1487319 - 1487915 | 21793.6 |
| arac family transcriptional regulator | DWZ36_06120 | Not Available | Positive | 1488026 - 1488865 | 32960.8 |
| winged helix-turn-helix transcriptional regulator | DWZ36_06125 | Not Available | Positive | 1488943 - 1490319 | 51606.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

