Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF31-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484022 bp
Thymine Count
1483399 bp
Guanine Count
1069820 bp
Cytosine Count
1074558 bp
Genome Length
5112322 bp
Protein-coding Genes
4162 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWZ36_06030 | Not Available | Positive | 1475535 - 1476143 | 23449.3 |
| hypothetical protein | DWZ36_06035 | Not Available | Positive | 1476156 - 1476356 | 7331.96 |
| hypothetical protein | DWZ36_06040 | Not Available | Positive | 1476353 - 1476874 | 19615.8 |
| n-acetylmuramoyl-l-alanine amidase | DWZ36_06045 | Not Available | Positive | 1476931 - 1477530 | 22077.3 |
| rna-binding protein | DWZ36_06050 | Not Available | Positive | 1477544 - 1477876 | 12664.9 |
| hypothetical protein | DWZ36_06055 | Not Available | Positive | 1478017 - 1478328 | 12316.7 |
| phage portal protein | DWZ36_06060 | Not Available | Positive | 1478288 - 1479871 | 59660.8 |
| hypothetical protein | DWZ36_06065 | Not Available | Positive | 1479883 - 1480905 | 40051.0 |
| hypothetical protein | DWZ36_06070 | Not Available | Positive | 1480874 - 1481377 | 18615.4 |
| gnat family n-acetyltransferase | DWZ36_06075 | Not Available | Positive | 1481343 - 1481903 | 21687.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

