Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF31-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484022 bp
Thymine Count
1483399 bp
Guanine Count
1069820 bp
Cytosine Count
1074558 bp
Genome Length
5112322 bp
Protein-coding Genes
4162 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWZ36_05980 | Not Available | Positive | 1465223 - 1465810 | 22751.7 |
| hypothetical protein | DWZ36_05985 | Not Available | Positive | 1465797 - 1467143 | 51548.6 |
| hypothetical protein | DWZ36_05990 | Not Available | Positive | 1467161 - 1468204 | 40058.2 |
| php domain-containing protein | DWZ36_05995 | Not Available | Positive | 1468191 - 1469924 | 66611.7 |
| atp-dependent dna helicase | DWZ36_06000 | Not Available | Positive | 1469927 - 1471252 | 50384.9 |
| dna polymerase iii subunit alpha | DWZ36_06005 | Not Available | Positive | 1471239 - 1473416 | 82873.7 |
| guanylate kinase | DWZ36_06010 | Not Available | Positive | 1473413 - 1473931 | 20002.1 |
| 3'-5' exonuclease | DWZ36_06015 | Not Available | Positive | 1473936 - 1474715 | 29020.7 |
| hypothetical protein | DWZ36_06020 | Not Available | Positive | 1474722 - 1474994 | 10260.2 |
| hypothetical protein | DWZ36_06025 | Not Available | Positive | 1475060 - 1475533 | 17669.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

