Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF31-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484022 bp
Thymine Count
1483399 bp
Guanine Count
1069820 bp
Cytosine Count
1074558 bp
Genome Length
5112322 bp
Protein-coding Genes
4162 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWZ36_05930 | Not Available | Positive | 1454789 - 1454998 | 7563.97 |
| hypothetical protein | DWZ36_05935 | Not Available | Positive | 1455420 - 1456133 | 27044.8 |
| adenosylcobalamin-dependent ribonucleoside-diphosphate reductase | DWZ36_05940 | Not Available | Positive | 1456139 - 1458367 | 82278.6 |
| hypothetical protein | DWZ36_05945 | Not Available | Positive | 1458583 - 1459056 | 18201.5 |
| hypothetical protein | DWZ36_05950 | Not Available | Positive | 1459029 - 1460474 | 55183.9 |
| phosphoesterase | DWZ36_05955 | Not Available | Positive | 1460545 - 1461585 | 39514.9 |
| hypothetical protein | DWZ36_05960 | Not Available | Positive | 1461587 - 1463923 | 86834.3 |
| hypothetical protein | DWZ36_05965 | Not Available | Positive | 1463901 - 1464383 | 18611.1 |
| hypothetical protein | DWZ36_05970 | Not Available | Positive | 1464386 - 1464655 | 10805.9 |
| rna polymerase sigma factor | DWZ36_05975 | Not Available | Positive | 1464619 - 1465269 | 25490.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

