Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF31-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484022 bp
Thymine Count
1483399 bp
Guanine Count
1069820 bp
Cytosine Count
1074558 bp
Genome Length
5112322 bp
Protein-coding Genes
4162 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1566 domain-containing protein | DWZ36_05875 | Not Available | Positive | 1438097 - 1444657 | 244146.0 |
| hypothetical protein | DWZ36_05880 | Not Available | Positive | 1444718 - 1445233 | 19336.2 |
| hypothetical protein | DWZ36_05885 | Not Available | Positive | 1445301 - 1445879 | 21927.5 |
| hypothetical protein | DWZ36_05890 | Not Available | Positive | 1445932 - 1446702 | 30045.8 |
| hypothetical protein | DWZ36_05895 | Not Available | Positive | 1446715 - 1447365 | 24972.7 |
| hypothetical protein | DWZ36_05905 | Not Available | Positive | 1450023 - 1450703 | 25714.7 |
| hypothetical protein | DWZ36_05910 | Not Available | Positive | 1450708 - 1451610 | 33931.8 |
| hypothetical protein | DWZ36_05915 | Not Available | Positive | 1451591 - 1452499 | 34461.4 |
| hypothetical protein | DWZ36_05920 | Not Available | Positive | 1452496 - 1453029 | 20874.3 |
| hypothetical protein | DWZ36_05925 | Not Available | Positive | 1453026 - 1454786 | 62887.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

