Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF31-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484022 bp
Thymine Count
1483399 bp
Guanine Count
1069820 bp
Cytosine Count
1074558 bp
Genome Length
5112322 bp
Protein-coding Genes
4162 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWZ36_05825 | Not Available | Positive | 1424957 - 1425355 | 15171.4 |
| hypothetical protein | DWZ36_05830 | Not Available | Positive | 1425337 - 1425522 | 7343.7 |
| phage tail tape measure protein | DWZ36_05835 | Not Available | Positive | 1425625 - 1429716 | 149241.0 |
| hypothetical protein | DWZ36_05840 | Not Available | Positive | 1429720 - 1430835 | 41522.2 |
| hypothetical protein | DWZ36_05845 | Not Available | Positive | 1430813 - 1432330 | 56707.6 |
| hypothetical protein | DWZ36_05850 | Not Available | Positive | 1432333 - 1433307 | 35635.0 |
| hypothetical protein | DWZ36_05855 | Not Available | Positive | 1433310 - 1435142 | 67358.8 |
| hypothetical protein | DWZ36_05860 | Not Available | Positive | 1435145 - 1437673 | 94493.6 |
| hypothetical protein | DWZ36_05865 | Not Available | Positive | 1437678 - 1437899 | 8045.44 |
| mfs transporter | DWZ36_05870 | Not Available | Positive | 1437896 - 1438078 | 6871.11 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

