Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF31-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484022 bp
Thymine Count
1483399 bp
Guanine Count
1069820 bp
Cytosine Count
1074558 bp
Genome Length
5112322 bp
Protein-coding Genes
4162 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWZ36_05725 | Not Available | Negative | 1406307 - 1406789 | 17252.7 |
| hypothetical protein | DWZ36_05730 | Not Available | Positive | 1407792 - 1408772 | 37575.7 |
| hypothetical protein | DWZ36_05735 | Not Available | Negative | 1408834 - 1410807 | 74864.3 |
| hypothetical protein | DWZ36_05740 | Not Available | Negative | 1410809 - 1411207 | 15231.6 |
| hypothetical protein | DWZ36_05745 | Not Available | Negative | 1411188 - 1411619 | 16774.4 |
| integrase | DWZ36_05750 | Not Available | Negative | 1411840 - 1412430 | 22921.4 |
| brca1 c terminus (brct) domain protein | DWZ36_05755 | Not Available | Negative | 1412591 - 1414534 | 72527.8 |
| dutp diphosphatase | DWZ36_05760 | Not Available | Negative | 1414591 - 1415061 | 17098.3 |
| hypothetical protein | DWZ36_05765 | Not Available | Negative | 1415067 - 1415399 | 12355.0 |
| hypothetical protein | DWZ36_05770 | Not Available | Negative | 1415380 - 1415835 | 17404.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

