Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF31-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484022 bp
Thymine Count
1483399 bp
Guanine Count
1069820 bp
Cytosine Count
1074558 bp
Genome Length
5112322 bp
Protein-coding Genes
4162 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna-splicing ligase rtcb | DWZ36_05575 | Not Available | Negative | 1385003 - 1386205 | 44590.8 |
| hypothetical protein | DWZ36_05580 | Not Available | Negative | 1386202 - 1386843 | 25079.0 |
| duf2829 domain-containing protein | DWZ36_05585 | Not Available | Negative | 1386896 - 1387615 | 27225.9 |
| hypothetical protein | DWZ36_05590 | Not Available | Negative | 1387627 - 1387986 | 13319.1 |
| hypothetical protein | DWZ36_05595 | Not Available | Negative | 1388335 - 1388916 | 22312.3 |
| ubiquitin carboxyl-hydrolase | DWZ36_05600 | Not Available | Negative | 1388980 - 1390077 | 41541.7 |
| hypothetical protein | DWZ36_05605 | Not Available | Negative | 1390080 - 1390481 | 15877.2 |
| hypothetical protein | DWZ36_05610 | Not Available | Negative | 1390469 - 1390921 | 18081.4 |
| hypothetical protein | DWZ36_05615 | Not Available | Negative | 1391355 - 1391567 | 8454.36 |
| hypothetical protein | DWZ36_05620 | Not Available | Negative | 1392271 - 1393533 | 48333.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

