Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF31-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484022 bp
Thymine Count
1483399 bp
Guanine Count
1069820 bp
Cytosine Count
1074558 bp
Genome Length
5112322 bp
Protein-coding Genes
4162 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWZ36_05525 | Not Available | Negative | 1380155 - 1380415 | 10280.5 |
| hypothetical protein | DWZ36_05530 | Not Available | Negative | 1380490 - 1380852 | 14255.5 |
| hypothetical protein | DWZ36_05535 | Not Available | Negative | 1380854 - 1381408 | 21081.4 |
| hypothetical protein | DWZ36_05540 | Not Available | Negative | 1381422 - 1381808 | 14702.4 |
| hypothetical protein | DWZ36_05545 | Not Available | Negative | 1381784 - 1382095 | 12505.0 |
| hypothetical protein | DWZ36_05550 | Not Available | Negative | 1382097 - 1382336 | 9057.83 |
| hypothetical protein | DWZ36_05555 | Not Available | Positive | 1382402 - 1382629 | 8835.88 |
| hypothetical protein | DWZ36_05560 | Not Available | Negative | 1382642 - 1382926 | 10565.9 |
| radical sam protein | DWZ36_05565 | Not Available | Negative | 1382935 - 1383747 | 30316.7 |
| hypothetical protein | DWZ36_05570 | Not Available | Negative | 1383759 - 1385006 | 47880.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

