Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF31-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484022 bp
Thymine Count
1483399 bp
Guanine Count
1069820 bp
Cytosine Count
1074558 bp
Genome Length
5112322 bp
Protein-coding Genes
4162 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribonuclease h | DWZ36_05475 | Not Available | Negative | 1375712 - 1376107 | 15039.0 |
| hypothetical protein | DWZ36_05480 | Not Available | Negative | 1376076 - 1376705 | 23604.6 |
| hypothetical protein | DWZ36_05485 | Not Available | Negative | 1377270 - 1377632 | 13939.1 |
| hypothetical protein | DWZ36_05490 | Not Available | Negative | 1377632 - 1377889 | 9843.58 |
| xre family transcriptional regulator | DWZ36_05495 | Not Available | Negative | 1377892 - 1378347 | 17120.9 |
| hypothetical protein | DWZ36_05500 | Not Available | Negative | 1378319 - 1378735 | 15869.0 |
| hypothetical protein | DWZ36_05505 | Not Available | Negative | 1378760 - 1379119 | 13007.6 |
| hypothetical protein | DWZ36_05510 | Not Available | Negative | 1379408 - 1379644 | 9040.08 |
| hypothetical protein | DWZ36_05515 | Not Available | Negative | 1379641 - 1379823 | 6878.18 |
| hypothetical protein | DWZ36_05520 | Not Available | Negative | 1379937 - 1380149 | 8047.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

