Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF31-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484022 bp
Thymine Count
1483399 bp
Guanine Count
1069820 bp
Cytosine Count
1074558 bp
Genome Length
5112322 bp
Protein-coding Genes
4162 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-asp | Not Available | Not Available | Positive | 1370487 - 1370563 | Not Available |
| hypothetical protein | DWZ36_05425 | Not Available | Positive | 1370674 - 1372095 | 55283.0 |
| hypothetical protein | DWZ36_05430 | Not Available | Negative | 1372165 - 1372419 | 9256.4 |
| hypothetical protein | DWZ36_05435 | Not Available | Negative | 1372481 - 1372795 | 12568.4 |
| hypothetical protein | DWZ36_05445 | Not Available | Negative | 1373315 - 1373794 | 18149.5 |
| hypothetical protein | DWZ36_05450 | Not Available | Negative | 1373802 - 1374053 | 9413.03 |
| hypothetical protein | DWZ36_05455 | Not Available | Negative | 1374062 - 1374283 | 8345.92 |
| hypothetical protein | DWZ36_05460 | Not Available | Negative | 1374303 - 1374548 | 9619.47 |
| hypothetical protein | DWZ36_05465 | Not Available | Negative | 1374896 - 1375228 | 12420.9 |
| hypothetical protein | DWZ36_05470 | Not Available | Negative | 1375434 - 1375694 | 9635.29 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

