Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF31-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484022 bp
Thymine Count
1483399 bp
Guanine Count
1069820 bp
Cytosine Count
1074558 bp
Genome Length
5112322 bp
Protein-coding Genes
4162 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nucleotidyltransferase domain-containing protein | DWZ36_05370 | Not Available | Positive | 1362681 - 1362989 | 11591.2 |
| hepn domain-containing protein | DWZ36_05375 | Not Available | Positive | 1362986 - 1363387 | 15666.6 |
| atp-dependent helicase | DWZ36_05380 | Not Available | Positive | 1363491 - 1365794 | 87978.0 |
| gtp-binding protein | DWZ36_05385 | Not Available | Negative | 1365904 - 1366506 | 23034.9 |
| sodium:solute symporter | DWZ36_05390 | Not Available | Negative | 1366472 - 1367953 | 55351.7 |
| recombination protein recr | DWZ36_05395 | Not Available | Positive | 1368032 - 1368649 | 22458.3 |
| hypothetical protein | DWZ36_05400 | Not Available | Positive | 1368670 - 1369140 | 17754.4 |
| n-acetyltransferase | DWZ36_05405 | Not Available | Positive | 1369137 - 1369673 | 20476.6 |
| yqge/algh family protein | DWZ36_05410 | Not Available | Negative | 1369666 - 1370256 | 22412.9 |
| hypothetical protein | DWZ36_05415 | Not Available | Positive | 1370312 - 1370509 | 7902.13 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

