Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF31-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484022 bp
Thymine Count
1483399 bp
Guanine Count
1069820 bp
Cytosine Count
1074558 bp
Genome Length
5112322 bp
Protein-coding Genes
4162 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tolc family protein | DWZ36_05165 | Not Available | Positive | 1311181 - 1312560 | 51471.9 |
| dna-binding protein | DWZ36_05170 | Not Available | Negative | 1312773 - 1313477 | 26937.6 |
| hypothetical protein | DWZ36_05175 | Not Available | Negative | 1313443 - 1313562 | 4138.87 |
| hypothetical protein | DWZ36_05180 | Not Available | Positive | 1313882 - 1314553 | 25581.6 |
| hypothetical protein | DWZ36_05185 | Not Available | Positive | 1314691 - 1315620 | 35632.5 |
| atp-binding cassette domain-containing protein | DWZ36_05190 | Not Available | Positive | 1315617 - 1316270 | 24548.9 |
| n-acetylglucosamine-6-phosphate deacetylase | DWZ36_05195 | Not Available | Negative | 1316494 - 1317657 | 42267.2 |
| duf4982 domain-containing protein | DWZ36_05200 | Not Available | Negative | 1317833 - 1320337 | 94032.8 |
| glycoside hydrolase family 92 protein | DWZ36_05205 | Not Available | Negative | 1320340 - 1322592 | 85450.5 |
| beta-n-acetylhexosaminidase | DWZ36_05210 | Not Available | Negative | 1322619 - 1324673 | 77096.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

