Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF31-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484022 bp
Thymine Count
1483399 bp
Guanine Count
1069820 bp
Cytosine Count
1074558 bp
Genome Length
5112322 bp
Protein-coding Genes
4162 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWZ36_00435 | Not Available | Negative | 70941 - 71207 | 9793.29 |
| ragb/susd family nutrient uptake outer membrane protein | DWZ36_00445 | Not Available | Negative | 71626 - 73191 | 58966.7 |
| tonb-dependent receptor | DWZ36_00450 | Not Available | Negative | 73213 - 76554 | 123127.0 |
| creatininase family protein | DWZ36_00455 | Not Available | Negative | 77203 - 77958 | 28518.2 |
| iron-containing alcohol dehydrogenase | DWZ36_00460 | Not Available | Negative | 77958 - 79130 | 42892.9 |
| atp-binding protein | DWZ36_00465 | Not Available | Positive | 79354 - 80625 | 49393.9 |
| hypothetical protein | DWZ36_00480 | Not Available | Negative | 82270 - 85737 | 133359.0 |
| glycoside hydrolase family 92 protein | DWZ36_00485 | Not Available | Positive | 86022 - 88238 | 83771.2 |
| glycoside hydrolase family 95 protein | DWZ36_00490 | Not Available | Positive | 88413 - 90815 | 88832.4 |
| mfs transporter | DWZ36_00495 | Not Available | Positive | 91002 - 92396 | 50755.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

