Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Prevotellaceae
Genus
Segatella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Prevotellaceae |
| Genus | Segatella |
| Species | Segatella copri |
| Strain | strain AF38-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1003111 bp
Thymine Count
1024665 bp
Guanine Count
834115 bp
Cytosine Count
823133 bp
Genome Length
3686043 bp
Protein-coding Genes
2868 genes
Non-Coding Genes
73 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4290 domain-containing protein | DW026_01905 | Not Available | Positive | 471111 - 471710 | 23196.7 |
| udp-n-acetylglucosamine 1-carboxyvinyltransferase | DW026_01910 | Not Available | Positive | 471741 - 473051 | 47700.5 |
| 16s rrna processing protein rimm | DW026_01915 | Not Available | Positive | 473142 - 473663 | 19613.1 |
| 1-deoxy-d-xylulose-5-phosphate reductoisomerase | DW026_01920 | Not Available | Positive | 473751 - 474911 | 42750.5 |
| rip metalloprotease rsep | DW026_01925 | Not Available | Positive | 475014 - 476396 | 51977.5 |
| lysm peptidoglycan-binding domain-containing protein | DW026_01930 | Not Available | Negative | 476491 - 477441 | 35345.0 |
| hypothetical protein | DW026_01935 | Not Available | Negative | 477677 - 477997 | 12454.3 |
| atp-dependent dna helicase recg | DW026_01940 | Not Available | Negative | 478076 - 480172 | 79657.0 |
| six-hairpin glycosidase | DW026_01950 | Not Available | Positive | 481263 - 484628 | 127973.0 |
| alpha-l-rhamnosidase | DW026_01955 | Not Available | Positive | 484687 - 487155 | 92457.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
