Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Prevotellaceae
Genus
Segatella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Prevotellaceae |
| Genus | Segatella |
| Species | Segatella copri |
| Strain | strain AF38-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1003111 bp
Thymine Count
1024665 bp
Guanine Count
834115 bp
Cytosine Count
823133 bp
Genome Length
3686043 bp
Protein-coding Genes
2868 genes
Non-Coding Genes
73 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| diaminopimelate dehydrogenase | DW026_09730 | Not Available | Positive | 2367565 - 2368464 | 32517.3 |
| serine dehydratase subunit alpha family protein | DW026_09735 | Not Available | Negative | 2368611 - 2369894 | 45534.4 |
| aminopeptidase | DW026_09740 | Not Available | Negative | 2370020 - 2371426 | 52993.1 |
| 1-deoxy-d-xylulose-5-phosphate synthase | DW026_09745 | Not Available | Positive | 2371605 - 2373497 | 69949.1 |
| trk system potassium transporter trka | DW026_09750 | Not Available | Positive | 2373494 - 2374837 | 49437.5 |
| trkh family potassium uptake protein | DW026_09755 | Not Available | Positive | 2374868 - 2376325 | 54065.8 |
| mannose-6-phosphate isomerase | DW026_09760 | Not Available | Positive | 2376513 - 2377475 | 36187.0 |
| duf4435 domain-containing protein | DW026_09765 | Not Available | Negative | 2377576 - 2378574 | 39623.8 |
| atp-binding protein | DW026_09770 | Not Available | Negative | 2378614 - 2379432 | 31094.8 |
| dmt family transporter | DW026_09775 | Not Available | Positive | 2379609 - 2380553 | 34682.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
