Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Prevotellaceae
Genus
Segatella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Prevotellaceae |
| Genus | Segatella |
| Species | Segatella copri |
| Strain | strain AF38-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1003111 bp
Thymine Count
1024665 bp
Guanine Count
834115 bp
Cytosine Count
823133 bp
Genome Length
3686043 bp
Protein-coding Genes
2868 genes
Non-Coding Genes
73 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-dependent helicase hrpb | DW026_00795 | Not Available | Negative | 217999 - 220575 | 95776.4 |
| hypothetical protein | DW026_00800 | Not Available | Negative | 220607 - 221380 | 29627.1 |
| glycosyltransferase | DW026_00805 | Not Available | Negative | 221444 - 222586 | 43942.3 |
| diaminopimelate decarboxylase | DW026_00810 | Not Available | Negative | 222662 - 223819 | 42636.2 |
| aspartate kinase | DW026_00815 | Not Available | Negative | 223959 - 225281 | 49175.0 |
| atp-binding cassette domain-containing protein | DW026_00820 | Not Available | Negative | 225309 - 226025 | 27049.6 |
| bifunctional phosphoribosyl-amp cyclohydrolase/phosphoribosyl-atp diphosphatase hisie | DW026_00825 | Not Available | Negative | 226058 - 226705 | 24454.3 |
| imidazole glycerol phosphate synthase subunit hisf | DW026_00830 | Not Available | Negative | 226749 - 227528 | 27994.3 |
| 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase | DW026_00835 | Not Available | Negative | 227589 - 228305 | 25980.3 |
| imidazole glycerol phosphate synthase subunit hish | DW026_00840 | Not Available | Negative | 228322 - 228960 | 24156.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
