Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM13-21 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1539821 bp
Thymine Count
1499100 bp
Guanine Count
1070173 bp
Cytosine Count
1133878 bp
Genome Length
5243870 bp
Protein-coding Genes
4129 genes
Non-Coding Genes
75 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cardiolipin synthase | DW150_15430 | Not Available | Negative | 3731993 - 3733429 | 55315.1 |
| tonb-dependent receptor | DW150_15435 | Not Available | Negative | 3733523 - 3736420 | 108274.0 |
| hypothetical protein | DW150_15440 | Not Available | Negative | 3736501 - 3736905 | 15550.9 |
| 3-dehydroquinate synthase | DW150_15445 | Not Available | Positive | 3737004 - 3738065 | 39929.3 |
| arac family transcriptional regulator | DW150_15450 | Not Available | Positive | 3738337 - 3739197 | 34022.7 |
| Trna-pro | Not Available | Not Available | Positive | 3739464 - 3739538 | Not Available |
| cation/h(+) antiporter | DW150_15460 | Not Available | Negative | 3739616 - 3741799 | 80822.5 |
| dna polymerase iv | DW150_15465 | Not Available | Positive | 3741907 - 3743004 | 41430.1 |
| adp-ribosylglycohydrolase | DW150_15470 | Not Available | Negative | 3742988 - 3743773 | 29761.6 |
| 2,3-diphosphoglycerate-dependent phosphoglycerate mutase | DW150_15475 | Not Available | Positive | 3743937 - 3744698 | 29102.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

