Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM13-21 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1539821 bp
Thymine Count
1499100 bp
Guanine Count
1070173 bp
Cytosine Count
1133878 bp
Genome Length
5243870 bp
Protein-coding Genes
4129 genes
Non-Coding Genes
75 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/gtp cyclohydrolase ii | DW150_12035 | Not Available | Positive | 3005282 - 3006496 | 44935.4 |
| pyridoxal phosphate-dependent aminotransferase | DW150_12040 | Not Available | Positive | 3006622 - 3007815 | 43043.4 |
| 4fe-4s dicluster domain-containing protein | DW150_12045 | Not Available | Negative | 3007994 - 3008161 | 5717.65 |
| beta-n-acetylglucosaminidase | DW150_12050 | Not Available | Negative | 3008279 - 3011257 | 111483.0 |
| bifunctional metallophosphatase/5'-nucleotidase | DW150_12055 | Not Available | Negative | 3011303 - 3012145 | 31238.1 |
| 5'-nucleotidase | DW150_12060 | Not Available | Negative | 3012157 - 3012936 | 27842.4 |
| 50s ribosomal protein l19 | DW150_12065 | Not Available | Positive | 3013135 - 3013488 | 13130.2 |
| hypothetical protein | DW150_12070 | Not Available | Positive | 3013643 - 3013861 | 7895.11 |
| hybrid sensor histidine kinase/response regulator | DW150_12075 | Not Available | Negative | 3013943 - 3018229 | 162681.0 |
| l-rhamnose mutarotase | DW150_12080 | Not Available | Negative | 3018311 - 3018625 | 12272.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

